| Genus | Species | Strains |
|---|---|---|
| Caldanaerobacter | subterraneus subsp. tengcongensis | 100824T |
| sp. | 104852 104853 | |
| Caldilinea | aerophila | 104270T |
| Caldimonas | manganoxidans | 16448T |
| taiwanensis | 104434T | |
| Caldisericum | exile | 104410T 106117 |
| Calditerrivibrio | nitroreducens | 101217T |
| Carboxydothermus | pertinax | 107576T |
| Carnobacterium | alterfunditum | 15548T |
| divergens | 15683T | |
| funditum | 15549T | |
| maltaromaticum | 15684 15685 | |
| Castellaniella | caeni | 101664T |
| Catellatospora | bangladeshensis | 107357T |
| chokoriensis | 107358T | |
| citrea | 14495T | |
| coxensis | 107359T | |
| methionotrophica | 14553T | |
| sp. | 101295 101296 101727 101728 | |
| Catellibacterium | aquatile | 104254T |
| nectariphilum | 100046T | |
| Catelliglobosispora | koreensis | 105861T |
| Catenulispora | acidiphila | 102108T |
| graminis | 107755T | |
| rubra | 101179T | |
| subtropica | 103395T 103396 | |
| yoronensis | 103397T | |
| Catenuloplanes | atrovinosus | 15579T 15577 15578 |
| castaneus | 15584T 15580 15581 15582 | |
| crispus | 15622T | |
| indicus | 15575T 15574 15576 | |
| japonicus | 14176T | |
| nepalensis | 15583T | |
| niger | 14177T | |
| sp. | 101688 101689 | |
| Cathayosporangium | alboflavum | 16009 |
| Caulobacter | fusiformis | 108622 |
| segnis | 15250T | |
| sp. | 108625 | |
| Cedecea | davisae | 105702T |
| neteri | 105707T | |
| Cellulomonas | aerilata | 106308T |
| biazotea | 12680T | |
| cellasea | 3753T | |
| composti | 100758T | |
| fimi | 15513T | |
| flavigena | 3775T | |
| gelida | 3748T | |
| hominis | 16055T | |
| iranensis | 101100T | |
| persica | 101101T | |
| terrae | 100819T | |
| uda | 3747T | |
| xylanilytica | 101102T | |
| sp. | 16064 | |
| Cellulophaga | lytica | 14961T 15985 15986 16020 16021 16022 101022 |
| pacifica | 101531T | |
| sp. | 101039 101309 | |
| Cellulosimicrobium | cellulans | 15516T 15013 16148 103059 |
| funkei | 104118T | |
| terreum | 106259T | |
| Cerasibacillus | quisquiliarum | 102429T |
| Cerasicoccus | arenae | 103621T |
| Chitinimonas | koreensis | 106425T |
| Chitiniphilus | shinanonensis | 104970T |
| Chitinophaga | arvensicola | 14973T 16132 16133 16134 16135 16137 16138 16139 |
| filiformis | 15056T | |
| japonensis | 16041T | |
| niabensis | 106412T | |
| niastensis | 106413T | |
| pinensis | 15968T 15969 | |
| sancti | 15057T 16033 16034 | |
| Chlorobaculum | tepidum | 103806T |
| Chlorobium | limicola | 103803T |
| Chromobacterium | violaceum | 12614T |
| Chromohalobacter | beijerinckii | 103041T |
| marismortui | 103155T | |
| sp. | 102401 102402 | |
| Chryseobacterium | balustinum | 15053T |
| daecheongense | 102008T | |
| gleum | 15054T | |
| humi | 104927T | |
| indologenes | 14944T | |
| jejuense | 106406T | |
| koreense | 103027T | |
| marinum | 103143T | |
| palustre | 104928T | |
| soldanellicola | 100864T | |
| soli | 106407T | |
| taeanense | 100863T | |
| wanjuense | 106394T | |
| sp. | 101301 101329 101330 | |
| Citorobacter | sp. | 13544 |
| Citricoccus | muralis | 106156T |
| sp. | 3763 | |
| Citrobacter | amalonaticus | 13547 |
| freundii | 12681T 13539 13545 13546 16624 | |
| koseri | 105690 | |
| rodentium | 105723T | |
| sedlakii | 105722T | |
| werkmanii | 105721T | |
| Clavibacter | michiganensis subsp. michiganensis | 13762 |
| michiganensis subsp. sepedonicus | 13763 13764 | |
| Cloacibacterium | rupense | 104931T |
| Clostridiales | bacterium | 108820 |
| Clostridium | acetobutylicum | 13948T |
| beijerinckii | 103909 | |
| butyricum | 13949T 3315 3858 | |
| caenicola | 102590T | |
| caproicum | 103907 | |
| clariflavum | 101661T | |
| cylindrosporum | 13695T | |
| flavum | 103908 | |
| kainantoi | 3353 | |
| kluyveri | 12016T | |
| pectinovorum | 103910 | |
| sporogenes | 13950T 14293 16411 | |
| straminisolvens | 103399T | |
| tertium | 103192T | |
| thermocellum | 103400T | |
| valerianicum | 103911 | |
| sp. | 102591 | |
| Cobetia | marina | 102605T 101995 101996 101997 101998 |
| Cohnella | fontinalis | 104957T |
| soli | 106486T | |
| suwonensis | 106485T | |
| Collimonas | sp. | 3740 |
| Comamonas | aquatica | 14918T |
| granuli | 101663T | |
| terrae | 106524T | |
| terrigena | 12685T 13299T | |
| testosteroni | 14951T 12047 12048 100989 | |
| Compostimonas | suwonensis | 106304T |
| Conchiformibius | kuhniae | 102458T |
| steedae | 102457T | |
| Conexibacter | arvalis | 106558T |
| woesei | 100937T | |
| Congregibacter | litoralis | 104960T |
| Corallococcus | coralloides | 100076 |
| Corynebacterium | acetoacidophilum | 12166 |
| ammoniagenes | 12071T 12612T 12072 | |
| amycolatum | 15207T | |
| callunae | 15359T | |
| efficiens | 100395T | |
| flavescens | 14136T | |
| glutamicum | 12168T 12105 12106 12115 12130 12131 12132 12151 12153 12169 12181 12182 12183 12184 12186 12398 12587 12590 | |
| humireducens | 106098T | |
| imitans | 100416T | |
| minutissimum | 15361T | |
| stationis | 12144T | |
| striatum | 15291T | |
| terpenotabidum | 14764T | |
| variabile | 15286T 14757 | |
| vitaeruminis | 12143T | |
| xerosis | 16721T 12684 | |
| sp. | 12104 12150 12185 12598 | |
| Couchioplanes | caeruleus subsp. azureus | 13993T |
| caeruleus subsp. caeruleus | 13939T | |
| Crocinitomix | catalasitica | 15977T |
| Cronobacter | sakazakii | 102416T 105698T |
| Crossiella | cryophila | 14475T |
| equi | 101840T | |
| Cryobacterium | flavum | 107879T |
| luteum | 107880T 107885 | |
| psychrophilum | 15735T | |
| Cryptosporangium | arvum | 15965T |
| aurantiacum | 13967T | |
| japonicum | 15966T | |
| minutisporangium | 15962T | |
| mongoliense | 105887T | |
| Cupriavidus | metallidurans | 102507T 101272 |
| necator | 102504 | |
| oxalaticus | 13593T | |
| sp. | 102194 102195 102460 102508 102509 | |
| Curtobacterium | ammoniigenes | 101786T |
| citreum | 12677T 15231 | |
| flaccumfaciens | 12156 | |
| herbarum | 103064T | |
| luteum | 12676T | |
| pusillum | 12674T 15232 | |
| sp. | 16391 16393 16400 | |
| Curvibacter | delicatus | 14919T |
| lanceolatus | 103051T | |
| Cyclobacterium | qasimii | 106168T |
| Cytophaga | aurantiaca | 16043T |
| fermentans | 15936T | |
| hutchinsonii | 15051T 16006 |